DataLad
docs
Getting started
Change log
Acknowledgments
Publications
Background and motivation
Delineation from related solutions
Basic principles
Data management use cases
Metadata
Customization and extension of functionality
Glossary
Command line reference
Python module reference
Configuration
DataLad
Docs
»
Index
Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
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W
_
__init__() (datalad.api.Dataset method)
A
ac (datalad.plugin.check_dates.CheckDates attribute)
activate() (datalad.auto.AutomagicIO method)
active (datalad.auto.AutomagicIO attribute)
add() (datalad.config.ConfigManager method)
(datalad.support.annexrepo.AnnexRepo method)
(in module datalad.api)
add_() (datalad.support.annexrepo.AnnexRepo method)
add_archive_content() (in module datalad.api)
add_entrypoints_to_interface_groups() (in module datalad.cmdline.main)
add_extra_filename_values() (in module datalad.plugin.addurls)
add_remote() (datalad.support.annexrepo.AnnexRepo method)
add_section() (datalad.customremotes.base.AnnexExchangeProtocol method)
add_url_to_file() (datalad.support.annexrepo.AnnexRepo method)
add_urls() (datalad.support.annexrepo.AnnexRepo method)
AddReadme (class in datalad.plugin.add_readme)
AddReadme.EnsureDataset (class in datalad.plugin.add_readme)
AddReadme.EnsureNone (class in datalad.plugin.add_readme)
AddReadme.EnsureStr (class in datalad.plugin.add_readme)
AddReadme.Parameter (class in datalad.plugin.add_readme)
Addurls (class in datalad.plugin.addurls)
Addurls.EnsureChoice (class in datalad.plugin.addurls)
Addurls.EnsureDataset (class in datalad.plugin.addurls)
Addurls.EnsureNone (class in datalad.plugin.addurls)
Addurls.EnsureStr (class in datalad.plugin.addurls)
Addurls.Parameter (class in datalad.plugin.addurls)
adjust() (datalad.support.annexrepo.AnnexRepo method)
aggregate_metadata() (in module datalad.api)
all_same() (in module datalad.utils)
annex
AnnexCustomRemote (class in datalad.customremotes.base)
AnnexExchangeProtocol (class in datalad.customremotes.base)
AnnexRemoteQuit
AnnexRepo (class in datalad.support.annexrepo)
annotate_paths() (in module datalad.api)
any_re_search() (in module datalad.utils)
anything2bool() (in module datalad.config)
API_URL (datalad.plugin.export_to_figshare.FigshareRESTLaison attribute)
ArchiveAnnexCustomRemote (class in datalad.customremotes.archives)
ArchivesCache (class in datalad.support.archives)
ArgumentParserDisableAbbrev (class in datalad.cmdline.main)
as_unicode() (in module datalad.utils)
assert_dict_equal() (in module datalad.tests.utils)
assert_in_results() (in module datalad.tests.utils)
assert_is_generator() (in module datalad.tests.utils)
assert_message() (in module datalad.tests.utils)
assert_no_errors_logged() (in module datalad.tests.utils)
assert_no_open_files() (in module datalad.utils)
assert_not_in_results() (in module datalad.tests.utils)
assert_re_in() (in module datalad.tests.utils)
assert_result_count() (in module datalad.tests.utils)
assert_result_values_cond() (in module datalad.tests.utils)
assert_result_values_equal() (in module datalad.tests.utils)
assert_status() (in module datalad.tests.utils)
assert_str_equal() (in module datalad.tests.utils)
assure_bool() (in module datalad.utils)
assure_bytes() (in module datalad.utils)
assure_dict_from_str() (in module datalad.utils)
assure_dir() (in module datalad.utils)
assure_extracted() (datalad.support.archives.ExtractedArchive method)
assure_iter() (in module datalad.utils)
assure_list() (in module datalad.utils)
assure_list_from_str() (in module datalad.utils)
assure_tuple_or_list() (in module datalad.utils)
assure_unicode() (in module datalad.utils)
auto_repr() (in module datalad.utils)
autoget (datalad.auto.AutomagicIO attribute)
AutomagicIO (class in datalad.auto)
AVAILABILITY (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
(datalad.customremotes.base.AnnexCustomRemote attribute)
B
BasicAnnexTestRepo (class in datalad.tests.utils_testrepos)
BasicGitTestRepo (class in datalad.tests.utils_testrepos)
BatchedAnnex (class in datalad.support.annexrepo)
BatchedAnnexes (class in datalad.support.annexrepo)
better_wraps() (in module datalad.utils)
C
cache (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
call() (datalad.cmd.Runner method)
CheckDates (class in datalad.plugin.check_dates)
CheckDates.EnsureChoice (class in datalad.plugin.check_dates)
CheckDates.EnsureDataset (class in datalad.plugin.check_dates)
CheckDates.EnsureNone (class in datalad.plugin.check_dates)
CheckDates.EnsureStr (class in datalad.plugin.check_dates)
CheckDates.Parameter (class in datalad.plugin.check_dates)
chpwd (class in datalad.utils)
clean() (datalad.support.archives.ArchivesCache method)
(datalad.support.archives.ExtractedArchive method)
(in module datalad.api)
clean_meta_args() (in module datalad.plugin.addurls)
clear() (datalad.support.annexrepo.BatchedAnnexes method)
clone() (in module datalad.api)
clone_url() (in module datalad.tests.utils)
close() (datalad.support.annexrepo.BatchedAnnex method)
(datalad.support.annexrepo.BatchedAnnexes method)
ColorFormatter (class in datalad.log)
commands (datalad.cmd.Runner attribute)
commit() (datalad.support.annexrepo.AnnexRepo method)
compress_files() (in module datalad.support.archives)
ConfigManager (class in datalad.config)
convert_field() (datalad.plugin.addurls.Formatter method)
copy_to() (datalad.support.annexrepo.AnnexRepo method)
COST (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
(datalad.customremotes.base.AnnexCustomRemote attribute)
create() (datalad.tests.utils_testrepos.InnerSubmodule method)
(datalad.tests.utils_testrepos.TestRepo method)
(in module datalad.api)
create_article() (datalad.plugin.export_to_figshare.FigshareRESTLaison method)
create_file() (datalad.tests.utils_testrepos.TestRepo method)
create_info_file() (datalad.tests.utils_testrepos.BasicAnnexTestRepo method)
(datalad.tests.utils_testrepos.BasicGitTestRepo method)
create_sibling() (in module datalad.api)
create_sibling_github() (in module datalad.api)
create_test_dataset() (in module datalad.api)
create_tree() (in module datalad.utils)
create_tree_archive() (in module datalad.utils)
CUSTOM_REMOTE_NAME (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
(datalad.customremotes.base.AnnexCustomRemote attribute)
custom_result_renderer() (datalad.plugin.check_dates.CheckDates static method)
(datalad.plugin.wtf.WTF static method)
cwd (datalad.cmd.Runner attribute)
D
datalad.auto (module)
datalad.cmd (module)
datalad.cmd.protocol
,
[1]
datalad.cmd.protocol.prefix
,
[1]
datalad.cmdline.common_args (module)
datalad.cmdline.helpers (module)
datalad.cmdline.main (module)
datalad.config (module)
datalad.consts (module)
datalad.crawl.cache
,
[1]
datalad.customremotes.archives (module)
datalad.customremotes.base (module)
datalad.customremotes.main (module)
datalad.exc.str.tblimit
,
[1]
datalad.externals.nda.dbserver
,
[1]
datalad.fake-dates
,
[1]
datalad.fake-dates-start
,
[1]
datalad.locations.cache
,
[1]
datalad.locations.dataset-procedures
,
[1]
datalad.locations.default-dataset
,
[1]
datalad.locations.system-plugins
,
[1]
datalad.locations.system-procedures
,
[1]
datalad.locations.user-plugins
,
[1]
datalad.locations.user-procedures
,
[1]
datalad.log (module)
datalad.log.level
,
[1]
datalad.log.name
,
[1]
datalad.log.names
,
[1]
datalad.log.namesre
,
[1]
datalad.log.outputs
,
[1]
datalad.log.timestamp
,
[1]
datalad.log.traceback
,
[1]
datalad.metadata.create-aggregate-annex-limit
,
[1]
datalad.metadata.maxfieldsize
,
[1]
datalad.metadata.nativetype
,
[1]
datalad.metadata.store-aggregate-content
,
[1]
datalad.plugin.add_readme (module)
datalad.plugin.addurls (module)
datalad.plugin.check_dates (module)
datalad.plugin.export_archive (module)
datalad.plugin.export_to_figshare (module)
datalad.plugin.no_annex (module)
datalad.plugin.wtf (module)
datalad.repo.direct
,
[1]
datalad.repo.version
,
[1]
datalad.runtime.raiseonerror
,
[1]
datalad.runtime.report-status
,
[1]
datalad.search.default-mode
,
[1]
datalad.search.index-default-documenttype
,
[1]
datalad.search.indexercachesize
,
[1]
datalad.support.annexrepo (module)
datalad.support.archives (module)
datalad.support.configparserinc (module)
datalad.tests.dataladremote
,
[1]
datalad.tests.heavyoutput (module)
datalad.tests.knownfailures.probe
,
[1]
datalad.tests.knownfailures.skip
,
[1]
datalad.tests.nonetwork
,
[1]
datalad.tests.nonlo
,
[1]
datalad.tests.noteardown
,
[1]
datalad.tests.protocolremote
,
[1]
datalad.tests.runcmdline
,
[1]
datalad.tests.ssh
,
[1]
datalad.tests.temp.dir
,
[1]
datalad.tests.temp.fs
,
[1]
datalad.tests.temp.fssize
,
[1]
datalad.tests.temp.keep
,
[1]
datalad.tests.ui.backend
,
[1]
datalad.tests.usecassette
,
[1]
datalad.tests.utils (module)
datalad.tests.utils_testrepos (module)
datalad.utils (module)
datalad.version (module)
dataset
Dataset (class in datalad.api)
datasetmethod() (datalad.plugin.add_readme.AddReadme method)
(datalad.plugin.addurls.Addurls method)
(datalad.plugin.check_dates.CheckDates method)
(datalad.plugin.export_archive.ExportArchive method)
(datalad.plugin.export_to_figshare.ExportToFigshare method)
(datalad.plugin.no_annex.NoAnnex method)
(datalad.plugin.wtf.WTF method)
deactivate() (datalad.auto.AutomagicIO method)
debug() (datalad.customremotes.base.AnnexCustomRemote method)
decode_input() (in module datalad.utils)
decompress_file() (in module datalad.support.archives)
default_backends (datalad.support.annexrepo.AnnexRepo attribute)
diff() (in module datalad.api)
disable_logger() (in module datalad.utils)
dlabspath() (in module datalad.utils)
do_execute_callables (datalad.customremotes.base.AnnexExchangeProtocol attribute)
do_execute_ext_commands (datalad.customremotes.base.AnnexExchangeProtocol attribute)
download_url() (in module datalad.api)
drop() (datalad.support.annexrepo.AnnexRepo method)
(in module datalad.api)
drop_key() (datalad.support.annexrepo.AnnexRepo method)
dry (datalad.cmd.Runner attribute)
E
enable_remote() (datalad.support.annexrepo.AnnexRepo method)
encode_filename() (in module datalad.utils)
end_section() (datalad.customremotes.base.AnnexExchangeProtocol method)
env (datalad.cmd.Runner attribute)
environment variable
PATH
,
[1]
error() (datalad.customremotes.base.AnnexCustomRemote method)
escape_filename() (in module datalad.utils)
eval_results() (datalad.plugin.add_readme.AddReadme method)
(datalad.plugin.addurls.Addurls method)
(datalad.plugin.check_dates.CheckDates method)
(datalad.plugin.export_archive.ExportArchive method)
(datalad.plugin.export_to_figshare.ExportToFigshare method)
(datalad.plugin.no_annex.NoAnnex method)
(datalad.plugin.wtf.WTF method)
expandpath() (in module datalad.utils)
ExportArchive (class in datalad.plugin.export_archive)
ExportArchive.EnsureDataset (class in datalad.plugin.export_archive)
ExportArchive.EnsureNone (class in datalad.plugin.export_archive)
ExportArchive.EnsureStr (class in datalad.plugin.export_archive)
ExportArchive.Parameter (class in datalad.plugin.export_archive)
ExportToFigshare (class in datalad.plugin.export_to_figshare)
ExportToFigshare.EnsureDataset (class in datalad.plugin.export_to_figshare)
ExportToFigshare.EnsureInt (class in datalad.plugin.export_to_figshare)
ExportToFigshare.EnsureNone (class in datalad.plugin.export_to_figshare)
ExportToFigshare.EnsureStr (class in datalad.plugin.export_to_figshare)
ExportToFigshare.Parameter (class in datalad.plugin.export_to_figshare)
extract() (in module datalad.plugin.addurls)
extract_metadata() (in module datalad.api)
ExtractedArchive (class in datalad.support.archives)
F
fail_with_short_help() (in module datalad.cmdline.main)
FigshareRESTLaison (class in datalad.plugin.export_to_figshare)
File (class in datalad.utils)
file_basename() (in module datalad.utils)
file_has_content() (datalad.support.annexrepo.AnnexRepo method)
filter_legal_metafield() (in module datalad.plugin.addurls)
find() (datalad.support.annexrepo.AnnexRepo method)
find_files() (in module datalad.utils)
finish() (datalad.support.annexrepo.ProcessAnnexProgressIndicators method)
fmt_to_name() (in module datalad.plugin.addurls)
format() (datalad.log.ColorFormatter method)
(datalad.plugin.addurls.Formatter method)
(datalad.plugin.addurls.RepFormatter method)
format_element() (datalad.utils.SequenceFormatter method)
format_field() (datalad.utils.SequenceFormatter method)
Formatter (class in datalad.plugin.addurls)
fsck() (datalad.support.annexrepo.AnnexRepo method)
G
generate_chunks() (in module datalad.utils)
generate_uuids() (in module datalad.customremotes.base)
get() (datalad.config.ConfigManager method)
(datalad.plugin.export_to_figshare.FigshareRESTLaison method)
(datalad.support.annexrepo.AnnexRepo method)
(datalad.support.annexrepo.BatchedAnnexes method)
(in module datalad.api)
get_annexed_files() (datalad.support.annexrepo.AnnexRepo method)
get_archive() (datalad.support.archives.ArchivesCache method)
get_article_ids() (datalad.plugin.export_to_figshare.FigshareRESTLaison method)
get_autodoc() (datalad.plugin.add_readme.AddReadme.Parameter method)
(datalad.plugin.addurls.Addurls.Parameter method)
(datalad.plugin.check_dates.CheckDates.Parameter method)
(datalad.plugin.export_archive.ExportArchive.Parameter method)
(datalad.plugin.export_to_figshare.ExportToFigshare.Parameter method)
(datalad.plugin.no_annex.NoAnnex.Parameter method)
(datalad.plugin.wtf.WTF.Parameter method)
get_commands_from_groups() (in module datalad.cmdline.main)
get_contentlocation() (datalad.customremotes.base.AnnexCustomRemote method)
(datalad.support.annexrepo.AnnexRepo method)
get_corresponding_branch() (datalad.support.annexrepo.AnnexRepo method)
get_dataset_pwds() (in module datalad.utils)
get_dataset_root() (in module datalad.utils)
get_datasets_topdir() (in module datalad.tests.utils)
get_description() (datalad.support.annexrepo.AnnexRepo method)
get_description_with_cmd_summary() (in module datalad.cmdline.main)
get_DIRHASH() (datalad.customremotes.base.AnnexCustomRemote method)
get_encoding_info() (in module datalad.utils)
get_envvars_info() (in module datalad.utils)
get_extracted_file() (datalad.support.archives.ExtractedArchive method)
get_extracted_filename() (datalad.support.archives.ExtractedArchive method)
get_extracted_files() (datalad.support.archives.ExtractedArchive method)
get_file_backend() (datalad.support.annexrepo.AnnexRepo method)
get_file_key() (datalad.support.annexrepo.AnnexRepo method)
get_file_parts() (in module datalad.plugin.addurls)
get_file_size() (datalad.support.annexrepo.AnnexRepo method)
get_file_url() (datalad.customremotes.archives.ArchiveAnnexCustomRemote method)
get_fmt_names() (in module datalad.plugin.addurls)
get_func_kwargs_doc() (in module datalad.utils)
get_function_nargs() (in module datalad.customremotes.base)
get_git_environ_adjusted() (datalad.cmd.GitRunner static method)
get_git_version() (in module datalad.config)
get_groupwanted() (datalad.support.annexrepo.AnnexRepo method)
get_ipython_shell() (in module datalad.utils)
get_key_backend() (datalad.support.annexrepo.AnnexRepo class method)
get_leading_directory() (datalad.support.archives.ExtractedArchive method)
get_logfilename() (in module datalad.utils)
get_max_path_length() (in module datalad.plugin.wtf)
get_metadata() (datalad.support.annexrepo.AnnexRepo method)
get_most_obscure_supported_name() (in module datalad.tests.utils)
get_mtimes_and_digests() (in module datalad.tests.utils)
get_open_files() (in module datalad.utils)
get_path_prefix() (in module datalad.utils)
get_preferred_content() (datalad.support.annexrepo.AnnexRepo method)
get_remotes() (datalad.support.annexrepo.AnnexRepo method)
get_repo_instance() (in module datalad.cmdline.helpers)
get_runner() (in module datalad.cmd)
get_size_from_key() (datalad.support.annexrepo.AnnexRepo static method)
get_special_remotes() (datalad.support.annexrepo.AnnexRepo method)
get_status() (datalad.support.annexrepo.AnnexRepo method)
get_subpaths() (in module datalad.plugin.addurls)
get_tempfile_kwargs() (in module datalad.utils)
get_timestamp_suffix() (in module datalad.utils)
get_toppath() (datalad.support.annexrepo.AnnexRepo class method)
get_trace() (in module datalad.utils)
get_tracking_branch() (datalad.support.annexrepo.AnnexRepo method)
get_url_parts() (in module datalad.plugin.addurls)
get_URLS() (datalad.customremotes.base.AnnexCustomRemote method)
get_urls() (datalad.support.annexrepo.AnnexRepo method)
get_value() (datalad.config.ConfigManager method)
(datalad.plugin.addurls.Formatter method)
(datalad.plugin.addurls.RepFormatter method)
getbool() (datalad.config.ConfigManager method)
getfloat() (datalad.config.ConfigManager method)
getIncludes() (datalad.support.configparserinc.SafeConfigParserWithIncludes static method)
getint() (datalad.config.ConfigManager method)
getpwd() (in module datalad.utils)
GIT_ANNEX_MIN_VERSION (datalad.support.annexrepo.AnnexRepo attribute)
git_annex_version (datalad.support.annexrepo.AnnexRepo attribute)
GitRunner (class in datalad.cmd)
H
has_option() (datalad.config.ConfigManager method)
has_section() (datalad.config.ConfigManager method)
HEADER (datalad.customremotes.base.AnnexExchangeProtocol attribute)
heavydebug() (datalad.customremotes.base.AnnexCustomRemote method)
HelpAction (class in datalad.cmdline.helpers)
HTTPPath (class in datalad.tests.utils)
I
ignore_nose_capturing_stdout() (in module datalad.tests.utils)
import_module_from_file() (in module datalad.utils)
import_modules() (in module datalad.utils)
info() (datalad.customremotes.base.AnnexCustomRemote method)
(datalad.support.annexrepo.AnnexRepo method)
init_datalad_remote() (in module datalad.customremotes.base)
init_remote() (datalad.support.annexrepo.AnnexRepo method)
initiate() (datalad.customremotes.base.AnnexExchangeProtocol method)
InnerSubmodule (class in datalad.tests.utils_testrepos)
install() (in module datalad.api)
integration() (in module datalad.tests.utils)
is_available() (datalad.support.annexrepo.AnnexRepo method)
is_crippled_fs() (datalad.support.annexrepo.AnnexRepo method)
is_direct_mode() (datalad.support.annexrepo.AnnexRepo method)
is_dirty() (datalad.support.annexrepo.AnnexRepo method)
is_explicit_path() (in module datalad.utils)
is_extracted (datalad.support.archives.ExtractedArchive attribute)
is_interactive() (in module datalad.utils)
is_legal_metafield() (in module datalad.plugin.addurls)
is_managed_branch() (datalad.support.annexrepo.AnnexRepo method)
is_remote_annex_ignored() (datalad.support.annexrepo.AnnexRepo method)
is_special_annex_remote() (datalad.support.annexrepo.AnnexRepo method)
is_under_annex() (datalad.support.annexrepo.AnnexRepo method)
is_valid_repo() (datalad.support.annexrepo.AnnexRepo class method)
items() (datalad.config.ConfigManager method)
K
keys() (datalad.config.ConfigManager method)
known_failure() (in module datalad.tests.utils)
known_failure_direct_mode() (in module datalad.tests.utils)
known_failure_v6() (in module datalad.tests.utils)
known_failure_v6_or_later() (in module datalad.tests.utils)
known_failure_windows() (in module datalad.tests.utils)
knows_annex() (in module datalad.utils)
L
line_profile() (in module datalad.utils)
link_file_load() (in module datalad.cmd)
lmtime() (in module datalad.utils)
lock() (datalad.support.annexrepo.AnnexRepo method)
log() (datalad.cmd.Runner method)
log_cwd (datalad.cmd.Runner attribute)
log_env (datalad.cmd.Runner attribute)
log_message() (datalad.tests.utils.SilentHTTPHandler method)
log_outputs (datalad.cmd.Runner attribute)
log_stdin (datalad.cmd.Runner attribute)
LogLevelAction (class in datalad.cmdline.helpers)
long_description() (datalad.plugin.add_readme.AddReadme.EnsureDataset method)
(datalad.plugin.add_readme.AddReadme.EnsureNone method)
(datalad.plugin.add_readme.AddReadme.EnsureStr method)
(datalad.plugin.addurls.Addurls.EnsureChoice method)
(datalad.plugin.addurls.Addurls.EnsureDataset method)
(datalad.plugin.addurls.Addurls.EnsureNone method)
(datalad.plugin.addurls.Addurls.EnsureStr method)
(datalad.plugin.check_dates.CheckDates.EnsureChoice method)
(datalad.plugin.check_dates.CheckDates.EnsureDataset method)
(datalad.plugin.check_dates.CheckDates.EnsureNone method)
(datalad.plugin.check_dates.CheckDates.EnsureStr method)
(datalad.plugin.export_archive.ExportArchive.EnsureDataset method)
(datalad.plugin.export_archive.ExportArchive.EnsureNone method)
(datalad.plugin.export_archive.ExportArchive.EnsureStr method)
(datalad.plugin.export_to_figshare.ExportToFigshare.EnsureDataset method)
(datalad.plugin.export_to_figshare.ExportToFigshare.EnsureNone method)
(datalad.plugin.export_to_figshare.ExportToFigshare.EnsureStr method)
(datalad.plugin.no_annex.NoAnnex.EnsureDataset method)
(datalad.plugin.no_annex.NoAnnex.EnsureNone method)
(datalad.plugin.wtf.WTF.EnsureChoice method)
(datalad.plugin.wtf.WTF.EnsureDataset method)
(datalad.plugin.wtf.WTF.EnsureNone method)
ls() (in module datalad.api)
M
main() (datalad.customremotes.base.AnnexCustomRemote method)
(in module datalad.cmdline.main)
(in module datalad.customremotes.archives)
(in module datalad.customremotes.main)
make_tempfile() (in module datalad.utils)
map_items() (in module datalad.utils)
md5sum() (in module datalad.utils)
merge_annex() (datalad.support.annexrepo.AnnexRepo method)
metadata() (in module datalad.api)
migrate_backend() (datalad.support.annexrepo.AnnexRepo method)
N
NestedDataset (class in datalad.tests.utils_testrepos)
NoAnnex (class in datalad.plugin.no_annex)
NoAnnex.EnsureDataset (class in datalad.plugin.no_annex)
NoAnnex.EnsureNone (class in datalad.plugin.no_annex)
NoAnnex.Parameter (class in datalad.plugin.no_annex)
nok_startswith() (in module datalad.tests.utils)
not_supported_on_windows() (in module datalad.utils)
nothing_cm() (in module datalad.utils)
O
obtain() (datalad.config.ConfigManager method)
ok_annex_get() (in module datalad.tests.utils)
ok_archives_caches() (in module datalad.tests.utils)
ok_broken_symlink() (in module datalad.tests.utils)
ok_clean_git() (in module datalad.tests.utils)
ok_endswith() (in module datalad.tests.utils)
ok_exists() (in module datalad.tests.utils)
ok_file_has_content() (in module datalad.tests.utils)
ok_file_under_git() (in module datalad.tests.utils)
ok_generator() (in module datalad.tests.utils)
ok_git_config_not_empty() (in module datalad.tests.utils)
ok_good_symlink() (in module datalad.tests.utils)
ok_startswith() (in module datalad.tests.utils)
ok_symlink() (in module datalad.tests.utils)
open_r_encdetect() (in module datalad.utils)
optional_args() (in module datalad.utils)
options() (datalad.config.ConfigManager method)
P
parser_add_common_opt() (in module datalad.cmdline.helpers)
partition() (in module datalad.utils)
patch_config() (in module datalad.tests.utils)
PATH
,
[1]
path (datalad.support.archives.ArchivesCache attribute)
(datalad.support.archives.ExtractedArchive attribute)
(datalad.tests.utils_testrepos.InnerSubmodule attribute)
(datalad.tests.utils_testrepos.TestRepo attribute)
path_is_subpath() (in module datalad.utils)
path_startswith() (in module datalad.utils)
populate() (datalad.tests.utils_testrepos.BasicAnnexTestRepo method)
(datalad.tests.utils_testrepos.BasicGitTestRepo method)
(datalad.tests.utils_testrepos.NestedDataset method)
(datalad.tests.utils_testrepos.SubmoduleDataset method)
(datalad.tests.utils_testrepos.TestRepo method)
posix_relpath() (in module datalad.utils)
post() (datalad.plugin.export_to_figshare.FigshareRESTLaison method)
precommit() (datalad.support.annexrepo.AnnexRepo method)
probe_known_failure() (in module datalad.tests.utils)
ProcessAnnexProgressIndicators (class in datalad.support.annexrepo)
progress() (datalad.customremotes.base.AnnexCustomRemote method)
protocol (datalad.cmd.Runner attribute)
proxy() (datalad.support.annexrepo.AnnexRepo method)
publish() (in module datalad.api)
put() (datalad.plugin.export_to_figshare.FigshareRESTLaison method)
put_file_under_git() (in module datalad.tests.utils)
R
read() (datalad.customremotes.base.AnnexCustomRemote method)
(datalad.support.configparserinc.SafeConfigParserWithIncludes method)
read_csv_lines() (in module datalad.utils)
readline_json() (in module datalad.support.annexrepo)
readline_rstripped() (in module datalad.support.annexrepo)
readlines_until_ok_or_failed() (in module datalad.support.annexrepo)
records_callables (datalad.customremotes.base.AnnexExchangeProtocol attribute)
records_ext_commands (datalad.customremotes.base.AnnexExchangeProtocol attribute)
reload() (datalad.config.ConfigManager method)
remove() (datalad.support.annexrepo.AnnexRepo method)
(in module datalad.api)
remove_section() (datalad.config.ConfigManager method)
rename_section() (datalad.config.ConfigManager method)
RepFormatter (class in datalad.plugin.addurls)
REPO_CLASS (datalad.tests.utils_testrepos.BasicAnnexTestRepo attribute)
(datalad.tests.utils_testrepos.BasicGitTestRepo attribute)
(datalad.tests.utils_testrepos.TestRepo attribute)
repo_info() (datalad.support.annexrepo.AnnexRepo method)
req_CHECKPRESENT() (datalad.customremotes.archives.ArchiveAnnexCustomRemote method)
(datalad.customremotes.base.AnnexCustomRemote method)
req_CHECKURL() (datalad.customremotes.archives.ArchiveAnnexCustomRemote method)
(datalad.customremotes.base.AnnexCustomRemote method)
req_CLAIMURL() (datalad.customremotes.base.AnnexCustomRemote method)
req_EXPORTSUPPORTED() (datalad.customremotes.base.AnnexCustomRemote method)
req_GETAVAILABILITY() (datalad.customremotes.base.AnnexCustomRemote method)
req_GETCOST() (datalad.customremotes.base.AnnexCustomRemote method)
req_INITREMOTE() (datalad.customremotes.base.AnnexCustomRemote method)
req_PREPARE() (datalad.customremotes.base.AnnexCustomRemote method)
req_REMOVE() (datalad.customremotes.archives.ArchiveAnnexCustomRemote method)
(datalad.customremotes.base.AnnexCustomRemote method)
req_TRANSFER() (datalad.customremotes.base.AnnexCustomRemote method)
req_WHEREIS() (datalad.customremotes.archives.ArchiveAnnexCustomRemote method)
(datalad.customremotes.base.AnnexCustomRemote method)
rerun() (in module datalad.api)
result_renderer (datalad.plugin.check_dates.CheckDates attribute)
(datalad.plugin.wtf.WTF attribute)
RFC
RFC 822
rm_url() (datalad.support.annexrepo.AnnexRepo method)
rmdir() (in module datalad.utils)
rmtemp() (in module datalad.utils)
rmtree() (in module datalad.utils)
rotree() (in module datalad.utils)
run() (datalad.cmd.GitRunner method)
(datalad.cmd.Runner method)
(in module datalad.api)
run_procedure() (in module datalad.api)
run_via_pbs() (in module datalad.cmdline.helpers)
Runner (class in datalad.cmd)
S
safe_print() (in module datalad.utils)
SafeConfigParserWithIncludes (class in datalad.support.configparserinc)
save() (in module datalad.api)
saved_generator() (in module datalad.utils)
search() (in module datalad.api)
SECTION_NAME (datalad.support.configparserinc.SafeConfigParserWithIncludes attribute)
sections() (datalad.config.ConfigManager method)
send() (datalad.customremotes.base.AnnexCustomRemote method)
send_unsupported() (datalad.customremotes.base.AnnexCustomRemote method)
SequenceFormatter (class in datalad.utils)
set() (datalad.config.ConfigManager method)
set_date() (in module datalad.tests.utils)
set_default_backend() (datalad.support.annexrepo.AnnexRepo method)
set_direct_mode() (datalad.support.annexrepo.AnnexRepo method)
set_groupwanted() (datalad.support.annexrepo.AnnexRepo method)
set_metadata() (datalad.support.annexrepo.AnnexRepo method)
set_preferred_content() (datalad.support.annexrepo.AnnexRepo method)
set_remote_dead() (datalad.support.annexrepo.AnnexRepo method)
set_remote_url() (datalad.support.annexrepo.AnnexRepo method)
setup_exceptionhook() (in module datalad.utils)
setup_parser() (in module datalad.cmdline.main)
(in module datalad.customremotes.main)
short_description() (datalad.plugin.add_readme.AddReadme.EnsureDataset method)
(datalad.plugin.add_readme.AddReadme.EnsureNone method)
(datalad.plugin.add_readme.AddReadme.EnsureStr method)
(datalad.plugin.addurls.Addurls.EnsureChoice method)
(datalad.plugin.addurls.Addurls.EnsureDataset method)
(datalad.plugin.addurls.Addurls.EnsureNone method)
(datalad.plugin.addurls.Addurls.EnsureStr method)
(datalad.plugin.check_dates.CheckDates.EnsureChoice method)
(datalad.plugin.check_dates.CheckDates.EnsureDataset method)
(datalad.plugin.check_dates.CheckDates.EnsureNone method)
(datalad.plugin.check_dates.CheckDates.EnsureStr method)
(datalad.plugin.export_archive.ExportArchive.EnsureDataset method)
(datalad.plugin.export_archive.ExportArchive.EnsureNone method)
(datalad.plugin.export_archive.ExportArchive.EnsureStr method)
(datalad.plugin.export_to_figshare.ExportToFigshare.EnsureDataset method)
(datalad.plugin.export_to_figshare.ExportToFigshare.EnsureNone method)
(datalad.plugin.export_to_figshare.ExportToFigshare.EnsureStr method)
(datalad.plugin.no_annex.NoAnnex.EnsureDataset method)
(datalad.plugin.no_annex.NoAnnex.EnsureNone method)
(datalad.plugin.wtf.WTF.EnsureChoice method)
(datalad.plugin.wtf.WTF.EnsureDataset method)
(datalad.plugin.wtf.WTF.EnsureNone method)
shortened_repr() (in module datalad.utils)
sibling
siblings() (in module datalad.api)
SilentHTTPHandler (class in datalad.tests.utils)
skip_httpretty_on_problematic_pythons() (in module datalad.tests.utils)
skip_if_no_module() (in module datalad.tests.utils)
skip_if_no_network() (in module datalad.tests.utils)
skip_if_on_windows() (in module datalad.tests.utils)
skip_if_scrapy_without_selector() (in module datalad.tests.utils)
skip_if_url_is_not_available() (in module datalad.tests.utils)
skip_ssh() (in module datalad.tests.utils)
slash_join() (in module datalad.utils)
slow() (in module datalad.tests.utils)
sorted_files() (in module datalad.utils)
sshrun() (in module datalad.api)
stamp_path (datalad.support.archives.ExtractedArchive attribute)
STAMP_SUFFIX (datalad.support.archives.ExtractedArchive attribute)
start() (datalad.support.annexrepo.ProcessAnnexProgressIndicators method)
(datalad.tests.utils.HTTPPath method)
start_section() (datalad.customremotes.base.AnnexExchangeProtocol method)
stop() (datalad.customremotes.archives.ArchiveAnnexCustomRemote method)
(datalad.customremotes.base.AnnexCustomRemote method)
(datalad.tests.utils.HTTPPath method)
strip_arg_from_argv() (in module datalad.cmdline.helpers)
subdataset
subdatasets() (in module datalad.api)
SubmoduleDataset (class in datalad.tests.utils_testrepos)
superdataset
SUPPORTED_SCHEMES (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
(datalad.customremotes.base.AnnexCustomRemote attribute)
supports_unlocked_pointers (datalad.support.annexrepo.AnnexRepo attribute)
swallow_logs() (in module datalad.utils)
swallow_outputs() (in module datalad.utils)
sync() (datalad.support.annexrepo.AnnexRepo method)
T
test() (in module datalad.api)
TestRepo (class in datalad.tests.utils_testrepos)
token (datalad.plugin.export_to_figshare.FigshareRESTLaison attribute)
try_multiple() (in module datalad.utils)
try_multiple_dec() (in module datalad.utils)
U
unannex() (datalad.support.annexrepo.AnnexRepo method)
uninstall() (in module datalad.api)
unique() (in module datalad.utils)
unixify_path() (in module datalad.support.archives)
unlink() (in module datalad.utils)
unlock() (datalad.support.annexrepo.AnnexRepo method)
(in module datalad.api)
unset() (datalad.config.ConfigManager method)
untracked_files (datalad.support.annexrepo.AnnexRepo attribute)
update() (in module datalad.api)
updated() (in module datalad.utils)
upload_file() (datalad.plugin.export_to_figshare.FigshareRESTLaison method)
url (datalad.tests.utils_testrepos.InnerSubmodule attribute)
(datalad.tests.utils_testrepos.TestRepo attribute)
URL_PREFIX (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
URL_SCHEME (datalad.customremotes.archives.ArchiveAnnexCustomRemote attribute)
usecase() (in module datalad.tests.utils)
uuid (datalad.support.annexrepo.AnnexRepo attribute)
W
WEB_UUID (datalad.support.annexrepo.AnnexRepo attribute)
whereis() (datalad.support.annexrepo.AnnexRepo method)
with_pathsep() (in module datalad.utils)
write_entries() (datalad.customremotes.base.AnnexExchangeProtocol method)
write_section() (datalad.customremotes.base.AnnexExchangeProtocol method)
WTF (class in datalad.plugin.wtf)
WTF.EnsureChoice (class in datalad.plugin.wtf)
WTF.EnsureDataset (class in datalad.plugin.wtf)
WTF.EnsureNone (class in datalad.plugin.wtf)
WTF.Parameter (class in datalad.plugin.wtf)
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